| Movie | Role |
|---|---|
| October Sky (1999) | Homer Hickam |
| Donnie Darko (2001) | Donnie Darko |
| Brokeback Mountain (2005) | Jack Twist |
| Prisoners (2013) | Detective Loki |
| Enemy (2013) | Adam Bell / Anthony Claire |
| Zodiac (2007) | Robert Graysmith |
| Nightcrawler (2014) | Louis Bloom, Producer |
| Demolition (2015) | Davis Mitchell |
| Spider-Man: Far From Home (2019) | Quentin Beck / Mysterio |
| Ambulance (2022) | Danny Sharp |
| Strange World (2022) | Searcher Clade (voice) |
| Guy Ritchie's The Covenant (2023) | Sgt. John Kinley |
| Bubble Boy (2001) | Jimmy Livingston |